Our heroes go to see an accent comet that only is seen for every 10 months, and at the same time, wakes up a dracony foal that can grant wishes who becomes friends with the CMC, however an old scientist-turned-magician wants to use it's power to bring back a rare species of equine and dragon, The Alidragon
One night, our heroes (along with the Backyardigans, Barney, Amy, Marcela, Cody, Blackie, Mitzi, & Gail Trent) head for an open field to watch a comet that is only seen for 10 months, just then, several trucks drive up and they started to set up the carnival. Our heroes began to enjoy the carnival, there they meet the Puzzle Place gang the CMC's old friends then Mako finds a poster for a magic show.
The Magic Show
Soon, at the magic show, they watch as the magician: Professor Tinkerputt and his daughter, Marry. Then the CMC hear a voice coming from a crystal the magician has. They head up to the stage to get a better look, then they are used in the next trick, a disappearing box trick. After the trick is performed, they are suddenly captured by the Dazzlings [who were disguised]! But Professor Tinkerputt then releases his Gengar, and orders it to use shadow ball, when it does, their balloon flies out of control and then it flies out of the tent. The 3 hear the voice again. And Tinkerputt revealed it was Stardust, a rare dracony, who is sleeping in a cocoon. But, Applejack, Rarity, and Rainbow Dash scoff about this. And Smudger says that all draconys are extinct and reveals that driver told him, but Duke concludes that if there is a dracony hibernating in a cocoon there is one. But Smudger still has his doubts.
Then, that night as the CMC held the cocoon, and there was the comet! Meanwhile, at one of the stalls, Rarity purchases a seven-paneled novelty that is said to grant a person one wish if a panel is closed for each night the comet appears and is visible in the sky. As it flew across the sky, then the cocoon starts to glow and rises, then it revealed Stardust! (a blue and green dracony). It floats down and the CMC catch her. Stardust then wakes up, but before Stardust awoke, and our heroes introduce themselves, then Marry runs up and our heroes explained that Stardust has awoken. Later, Tinkerputt reveals his true purpose. He wishes to use Stardust's power to bring back a rare Alidragon.
The CMC's first wish
Then, as the team hang in Tinkerputt's bus, the CMC decide to make a wish. Apple Bloom wishes for several candy apples, Stardust did it, but nothing happened, then there was one and then some more start appearing, the other ponies wanted to make their wishes. But then, they find out that Stardust didn't make the candy apples, she teleported them from the snack stand. The 3 pony sisters then tell Stardust to reverse everything. However Stardust, makes them disappear! But then they find them inside the pile of candy apples. Once they've pulled them out, Stardust falls asleep. Later that night, Rarity closes the first panel.
Next day/Tinkerputt's plan in action
Next morning, after the CMC and Stardust awake and they started to have fun. Then in a far away land, a Lucario senses something is wrong, and then races for the carnival. That night after a show, the crusaders continue playing with Stardust, they herd a strange sound just then the Lucario appears! He uses aura sphere to attack them, but then he tries to get our heroes but falls in a trap door. Which Tinkerputt happened to have prepared. Then orders Genger to use hypnosis. And the Lucario falls asleep. Then Stardust falls asleep. Before the rest of our heroes turn in for the night, Rarity closes the next panel. She sees Tinkerputt carrying Stardust to his tent, she slowly and quietly follows behind.
Then, we see a huge machine of some kind in Tinkerputt's tent, then he place Stardust into a clamp part, and then he awakens Stardust. Then a flashback plays, Tinkerputt has built a machine that he plans to use to bring back an Alidragon, but when he turns it on, the machine goes hay-wire and then explodes, the other scientists mock him and then he grabs the piece and vows revenge. Back in reality he has Genger use hypnosis on Stardust, and he screams in pain. Rarity quickly alerts the others and then they woke up, and explains that Stardust is missing. Then, Stardust fires a beam at the comet, our heroes race in the tent as a beam returns down and causes an explosion.
Stardust severely hurt, Tinkerputt requests the CMC to hand him over but Marry tries to make him change his mind. Quickly, our heroes flee with Marry, while Tinkerputt's Hounddom puts a tricking device under his bus. The Dazzlings also follow close behind.
Heading to Dracony land
As the bus drives on, Marry explains that Tinkerputt is bringing back a rare creature called the Alidragon. Some of our heroes are confused about this, but Luna explains that the Alidragon is a rare hybrid species of Alicorn and Dragon that is said to have many great powers. And Marry explains that Stardust can drain the comet's power, and create the Alidragon, by draining all it's power down to his body. Meanwhile, Tinkerputt deploys an airship and follows them as the bus goes on. But while going on rough terrain, the tracker falls off. That night, Rarity closes the next panel as the others have made camp. And some are asleep. Then she heads into the bus and sees Marry, she asks what's wrong. Then she revealed that her father was once a comedian, before he became a magician. But then one day, he was fired from his job so then he joined the bad science team Dragon. After hearing that, Rarity is surprised about this. Outside, Lucario watches our heroes. Later Stardust wakes up Smudger and gives him some food (Forbidden Friendship). After several things that last through the night, Smudger accepts Stardust's trust and apologizes to him.
The next morning, the bus races along a mountain road. Then they get stuck in the mud, but some of the team manage to push it free. (But some of our heroes get covered in mud) then Rarity closes the next panel as they rest again. Rainbow then teaches the Scootaloo how to skip a rock, and Scootaloo makes a farther rock skip than Rainbow. Next day, they were driving again, but the CMC feel down because their last night with Stardust is soon coming.
Then, one night after Rarity closes another panel, the CMC tell her to stop. And then they sit by a riverbed with Stardust. Then Brian comes up, and explains that despite Stardust leaving, he'll always be with them.
After a little bit, they reach Dracony Land! There were draconies everywhere, even some other rare hybrids of equines and reptiles. Then, that night Rarity closes the next panel, then sees the CMC playing with Stardust while they still have time with him. Then Rarity sings them a lullaby and they sleep. The next day, they found Lucario and he led them the way. And then they come to a huge cavern, and Stardust sees the comet. The CMC sadly tell him not to leave. At this moment Smudger finally cries about this moment, but Stardust says they are his friends and he'll always be with them, no matter what. Then he opens his true eyes and starts to absorb the comet's energy.
Then suddenly something catches Stardust! It was Tinkerputt! Then, he traps everyone else in a forcefeild. He then place Stardust into his machine and begins. Then Lucario appears and a Salamence (whom our heroes see early) frees the others, quickly, Princess Celestia teleports some of our heroes' planes into the location and they quickly take to the skies, (some riding the Salamence) Cody, Amy, Marcela, and Barney then use their imagination (with help from the audience) to turn a log into a plane. But Tinkerputt doesn't give up easily, and he sets out his Charizard to get rid of our heroes. Soon, they've rescued Stardust and brought him down to the ground.
The Alidragon rises!
As they battle goes on, the ground starts to rumble, and then it rises. Then suddenly, a huge dragon comes out! But, it isn't a real Alidragon, it was a fake! It starts killing the plants by absorbing their energy, and then he starts eating the other animals with huge fireballs. Tinkerputt realizes his mistake, the virus beast also sucks up the Dazzlings (who have managed to keep up with our heroes). Then it swallows Marry, and then later it eats her, as it starts to lay it's eyes onto Stardust. And chases our heroes, as it chases them, it then eats Gail, much to Zoe's shock. Then it got Rarity, it nearly tries to eat our heroes but Stardust teleported them away just in time.
Then Tinkerputt reveals that the only way to stop it, is by reversing the effects by using his machine to make Stardust suck all the energy out of the Alidragon. Our heroes refuse, but after Stardust saved Tinkerputt's life when the Alidragon nearly eats Charizard. They decide to help.
Battling the Alidragon
While our heroes keep the beast distracted, Tinkerputt throws the switches to the opposite position on his machine. As this goes on, the beast then eats Salamence and Charizard! But the CMC, and their friends continue to keep the beast distracted, (some of them drawing fire at it). Then it sucks Tinkerputt, but he claims it will help him stick with Marry. Then the beast begins to suffer and prepares to engulf our heroes, but Stardust then shines and takes the creature up and explodes!
Stardust's goodbye/Happy ending
After the beast is defeated, everyone and everything it took is released and restored. Then Stardust comes back down, the CMC catch him. But he's feeling very tired and request the others to sing Rarity's song. They all sing her song and Stardust then turns back to a cocoon, after the CMC share one last hug with him. Then he goes into the ground to sleep in his 10 month slumber once again, but his voice then calls for them that they'll all be best friends forever and he'll always be their brother. Later, Tinkerputt and Marry decide to stay at Dracony land but they will give our heroes a lift back bu then Rarity realizes that she didn't close the last panel. But admits it doesn't matter as long as she has her sister. Then Barney turns back into his doll form and winks at the audience as the credits then play.
- This film is based off the movie, "Pokemon: Jirachi Wish Maker"
- Duke, Smudger, The Backyardigans, Kipper, Tiger, Pig, Arnold, Barney, BJ, Baby Bop, Amy, Marcela, Cody, Blackie the Lamb, Mitzi, Gail Trent, and The Dazzlings guest star in this film.
- This marks the first appearance of Stardust, Professor Tinkerputt, and The Alidragon.
- The Carnival
- The magic show
- Stardust awakens
- The CMC's first wish
- Next day/Tinkerputt's plan in action
- Heading to Dracony land
- Dracony land!
- Tinkerputt returns
- The Alidragon rises!
- Destroying the fake Alidragon
- Stardust's goodbye/Happy ending
- Rarity's lullaby
- My Drunken Irish Dad
- Forbidden Friendship [when Smudger finally gets around with Stardust]
- The Battle "from The Chronicles of Narnia" [when our heroes battle the Alidragon]